> On 06 Apr 2016, at 07:54, Bernd Hahnebach <g...@b75.ch> wrote: > > Zitat von Christophe Geuzaine <cgeuza...@ulg.ac.be>: > >> >>> On 05 Apr 2016, at 19:19, Bernd Hahnebach <g...@b75.ch> wrote: >>> >>> Found it. It seams a known problem on Debian Jessie (I do not know about >>> other debian). See https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=756472 >>> >>> Makeing this changes to the CMakeLists.txt did the trick. HDF5 where found. >>> >> >> Thanks - I've merge the Debian patch into our CMakeLists.txt. > > Where? https://onelab.info/svn/gmsh/trunk/CMakeLists.txt has not been changed > ! >
Cf. https://onelab.info/trac/gmsh/timeline: I merged the patch, then reverted it as it broke our nightly builds... (maybe this requires a too recent version of cmake) Doesn't the old version work if you specify the path where the hdf5 stuff is installed using e.g. cmake -DCMAKE_PREFIX_PATH=/path/to/hdf5/stuff .. > Bernd > > > >> >> >>> cheers bernd >>> >>> >>> Zitat von Bernd Hahnebach <g...@b75.ch>: >>> >>>> For med support on Debian Jessie package libmedc-dev has to be installed. >>>> Watchout for the c ! >>>> >>>> But the culprit is somewhere else. Cmake only searches for libmed if HDF5 >>>> was found. OK run cmake ../ again. >>>> YEAH >>>> -- HDF5_LIB-NOTFOUND >>>> -- HDF5 not found >>>> >>>> ok I searched for them, and they seam installed. OK >>>> >>>> cmake \ >>>> -DHDF5_LIB=/usr/lib/x86_64-linux-gnu/libhdf5_cpp.so.8.0.2 \ >>>> ../ >>>> >>>> BUT >>>> >>>> [ 1%] Building CXX object CMakeFiles/gmsh.dir/Common/CommandLine.cpp.o >>>> In file included from >>>> /home/hugo/Documents/dev/gmsh/gmsh-dev/Common/CommandLine.cpp:41:0: >>>> /usr/include/med.h:22:18: fatal error: hdf5.h: Datei oder Verzeichnis >>>> nicht gefunden >>>> #include <hdf5.h> >>>> ^ >>>> compilation terminated. >>>> >>>> >>>> BUT >>>> >>>> $ locate hdf5.h >>>> /usr/include/hdf5/serial/hdf5.h >>>> /usr/include/vtk-6.1/vtk_hdf5.h >>>> >>>> >>>> Which results in how do I set the include Dir for hdf5 ? >>>> >>>> Bernd >>>> >>>> >>>> Zitat von Christophe Geuzaine <cgeuza...@ulg.ac.be>: >>>> >>>>> >>>>>> On 04 Apr 2016, at 17:49, Bernd Hahnebach <g...@b75.ch> wrote: >>>>>> >>>>>> According CMakeLists.txt is MED support activated by default >>>>>> >>>>>> opt(MED "Enable MED mesh and post file formats" ${DEFAULT}) >>>>>> >>>>>> >>>>>> But at my cmake output it is missing, but cmake does not complain some >>>>>> library is missing ?!? How do I set the path to libmedc1 for cmake gmsh? >>>>>> >>>>> >>>>> Bernd - Gmsh looks for a library named libmed (.a, .so, .dylib, etc.): >>>>> not sure why yours is named libmedc1? >>>>> >>>>> You can modify the line >>>>> >>>>> find_library(MED_LIB med) >>>>> >>>>> into >>>>> >>>>> find_library(MED_LIB medc1) >>>>> >>>>> in the CMakeLists.txt file to see if this fixes it. >>>>> >>>>>> cheers bernd >>>>>> >>>>>> >>>>>> cmake gmsh >>>>>> >>>>>> -- Gmsh 2.12.1 has been configured for Linux >>>>>> -- >>>>>> -- * Build options: Ann Bamg Bfgs Blas(Generic) Blossom Cairo Chaco >>>>>> DIntegration Dlopen Fltk GMP Gmm Jpeg Kbipack Lapack(Generic) >>>>>> LinuxJoystick MathEx Mesh Metis Mmg3d Mpeg NativeFileChooser Netgen >>>>>> ONELAB ONELABMetamodel OpenCascade OpenGL OptHom Parser Plugins Png Post >>>>>> Salome Solver Taucs TetGen/BR Tetgen1.5 Voro3D Zlib >>>>>> >>>>>> >>>>>> >>>>>> >>>>>> Zitat von Bernd Hahnebach <g...@b75.ch>: >>>>>> >>>>>>> Hi gmsh folks, >>>>>>> >>>>>>> just compiled gmsh on debian jessie. It worked like a charm. I have >>>>>>> libmedc1 installed but gmsh compiled without med support. How is >>>>>>> support for med export activated in cmake? >>>>>>> >>>>>>> cheers bernd >>>>>>> >>>>>>> >>>>>>> >>>>>>> _______________________________________________ >>>>>>> gmsh mailing list >>>>>>> gmsh@onelab.info >>>>>>> http://onelab.info/mailman/listinfo/gmsh >>>>>>> >>>>>> >>>>>> >>>>>> >>>>>> >>>>>> >>>>>> _______________________________________________ >>>>>> gmsh mailing list >>>>>> gmsh@onelab.info >>>>>> http://onelab.info/mailman/listinfo/gmsh >>>>> >>>>> -- >>>>> Prof. Christophe Geuzaine >>>>> University of Liege, Electrical Engineering and Computer Science >>>>> http://www.montefiore.ulg.ac.be/~geuzaine >>>>> >>>>> Tetrahedron V, July 4-5 2016: http://tetrahedron.montefiore.ulg.ac.be >>>>> Free software: http://gmsh.info | http://getdp.info | http://onelab.info >>>>> >>>>> >>>>> >>>> >>>> >>>> >>>> >>>> >>>> _______________________________________________ >>>> gmsh mailing list >>>> gmsh@onelab.info >>>> http://onelab.info/mailman/listinfo/gmsh >>>> >>> >>> >>> >>> >>> >>> _______________________________________________ >>> gmsh mailing list >>> gmsh@onelab.info >>> http://onelab.info/mailman/listinfo/gmsh >> >> -- >> Prof. Christophe Geuzaine >> University of Liege, Electrical Engineering and Computer Science >> http://www.montefiore.ulg.ac.be/~geuzaine >> >> Tetrahedron V, July 4-5 2016: http://tetrahedron.montefiore.ulg.ac.be >> Free software: http://gmsh.info | http://getdp.info | http://onelab.info >> >> >> > > > > -- Prof. Christophe Geuzaine University of Liege, Electrical Engineering and Computer Science http://www.montefiore.ulg.ac.be/~geuzaine Tetrahedron V, July 4-5 2016: http://tetrahedron.montefiore.ulg.ac.be Free software: http://gmsh.info | http://getdp.info | http://onelab.info _______________________________________________ gmsh mailing list gmsh@onelab.info http://onelab.info/mailman/listinfo/gmsh
