Dear Vincent, This should be fixed in the SVN version (or recent nightly snapshots). Give it a try and let us know.
Christophe > On 19 May 2016, at 12:10, Vincent Huber <[email protected]> wrote: > > Dear all, > > I have compiled this http://gmsh.info/src/gmsh-2.12.0-source.tgz > with > > cmake \ > -DCMAKE_CXX_COMPILER=`which g++` \ > -DCMAKE_C_COMPILER=`which gcc` \ > -DCMAKE_INSTALL_PREFIX=/data/software/install/gmsh- > 2.12.0 > \ > -DCMAKE_BUILD_TYPE=release \ > -DENABLE_BUILD_LIB=ON \ > -DENABLE_BUILD_SHARED=ON \ > -DENABLE_BUILD_DYNAMIC=ON \ > -DENABLE_MPI=OFF \ > -DENABLE_MUMPS=OFF \ > -DENABLE_OPENMP=OFF \ > .. > > The logs are at the end of the mail. > > I have meshed demos/sphere.geo with: > > gmsh -3 > demos/sphere.geo > > successfully. > > problem here > the partition process goes wrong: > > gmsh -3 -part 3 > demos/sphere.geo > > (see logs at the end). > > Please note I have successfully meshed and partitioned a mesh from the GUI. > > All the best, > > VH > > CMake > > -- Found Blas(ATLAS) > -- Found Lapack(ATLAS) > -- Found Mesh > -- Found Solver > -- Found Post > -- Found Plugins > -- Found Parser > -- Found Fltk > -- Using fltk-config script > for Fltk 1.3 > > -- Found NativeFileChooser > -- Found ONELAB > -- Found ONELABMetamodel > -- Found Jpeg > -- Found Zlib > -- Found Png > -- Found Mpeg > -- Found OpenGL > -- Found Ann > -- Found Bfgs > -- Found Cairo > -- Found DIntegration > -- Found OptHom > -- Found Kbipack > -- Found GMP > -- Found MathEx > -- Found Metis > -- Note: By including Metis you have to comply with Metis > ' special licensing requirements stated in contrib/Metis/README.txt. > -- Found Chaco > -- Found Voro3D > -- Found Blossom > -- Found Netgen > -- Found Bamg > -- System MMG3D not found: using contrib/mmg3d instead > -- Found Mmg3d > -- Found Tetgen(1.5) > -- Note: By including Tetgen you have to comply with Tetgen' > s special licensing requirements stated in > contrib/Tetgen*/LICENSE. > -- System GMM not found: using contrib/gmm instead > -- Found Gmm > -- Found Taucs > -- Using PETSc dir: /data/software/install/petsc- > 3.6.3/openmpi-1.10.0 > > -- Using PETSc arch: > -- Found PETSc > -- Using SLEPc dir: /data/software/install/slepc- > 3.6.3/openmpi-1.10.0 > > -- Found SLEPc > -- Found OpenCascade > -- Found Salome > -- Found Dlopen > -- Found LinuxJoystick > -- > -- Gmsh > 2.12.0 has been configured for > Linux > -- > -- * Build options: Ann Bamg Bfgs Blas(ATLAS) Blossom Cairo Chaco > DIntegration Dlopen Fltk GMP Gmm Jpeg Kbipack Lapack(ATLAS) LinuxJoystick > MathEx Mesh Metis Mmg3d Mpeg NativeFileChooser Netgen ONELAB ONELABMetamodel > OpenCascade OpenGL OptHom PETSc Parser Plugins Png Post SLEPc Salome Solver > Taucs Tetgen( > 1.5 > ) Voro3D Zlib > -- * Build > type > : release > -- * C compiler: /data/software/install/gcc- > 4.9.0 > /bin/gcc > -- * C++ compiler: /data/software/install/gcc- > 4.9.0 > /bin/g++ > -- * Install prefix: /data/software/install/gmsh- > 2.12.0 > > -- > -- Configuring > done > > -- Generating > done > > -- Build files have been written to: /data/software/src/gmsh- > 2.12.0 > -source/build > > partitioning > > Info : Running ‘gmsh -3 ./demos/sphere.geo -part 3’ [Gmsh 2.12.0, 1 node, > max. 1 thread] > Info : Started on Thu May 19 12:06:01 2016 > Info : Reading ‘./demos/sphere.geo’… > Info : Done reading ‘./demos/sphere.geo’ > Info : Meshing 1D… > Info : Meshing curve 1 (Circle) > Info : Meshing curve 2 (Circle) > Info : Meshing curve 3 (Circle) > Info : Meshing curve 4 (Circle) > Info : Meshing curve 5 (Circle) > Info : Meshing curve 6 (Circle) > Info : Meshing curve 7 (Circle) > Info : Meshing curve 8 (Circle) > Info : Meshing curve 9 (Circle) > Info : Meshing curve 10 (Circle) > Info : Meshing curve 11 (Circle) > Info : Meshing curve 12 (Circle) > Info : Done meshing 1D (0.003091 s) > Info : Meshing 2D… > Info : Meshing surface 14 (Ruled surface, Frontal) > Info : Meshing surface 16 (Ruled surface, Frontal) > Info : Meshing surface 18 (Ruled surface, Frontal) > Info : Meshing surface 20 (Ruled surface, Frontal) > Info : Meshing surface 22 (Ruled surface, Frontal) > Info : Meshing surface 24 (Ruled surface, Frontal) > Info : Meshing surface 26 (Ruled surface, Frontal) > Info : Meshing surface 28 (Ruled surface, Frontal) > Info : Done meshing 2D (0.20296 s) > Info : Meshing 3D… > Info : Delaunay Meshing 1 volumes with 1 connected components > Info : Meshing volume 30 (Delaunay) > Delaunizing vertices… > Delaunay seconds: 0.527774 > Creating surface mesh … > Surface mesh seconds: 0.004444 > Recovering boundaries… > Boundary recovery seconds: 0.004269 > Removing exterior tetrahedra … > Exterior tets removal seconds: 0.000612 > Recovering Delaunayness… > Delaunay recovery seconds: 0.146909 > Optimizing mesh… > Optimization seconds: 0.00224 > > Writing nodes. > Writing elements. > Writing faces. > Writing edges. > > Output seconds: 0.002485 > Total running seconds: 0.68894 > > Statistics: > > Input points: 1603 > Input facets: 3202 > Input segments: 4803 > Input holes: 0 > Input regions: 0 > > Mesh points: 1603 > Mesh tetrahedra: 4448 > Mesh faces: 10497 > Mesh edges: 7651 > Mesh faces on exterior boundary: 3202 > Mesh edges on exterior boundary: 4803 > Mesh faces on input facets: 3202 > Mesh edges on input segments: 4803 > > Info : 1603 points 7651 edges and 3202 faces in the initial mesh > Info : Found region 30 > Info : 0 points created - Worst tet radius is 10.7622 (PTS removed 0 0) > Info : 3D point insertion terminated (4111 points created): > Info : - 0 Delaunay cavities modified for star shapeness > Info : - 0 points could not be inserted > Info : - 20740 tetrahedra created in 0.213642 sec. (97078 tets/sec.) > Info : Done meshing 3D (0.972973 s) > Info : 4112 vertices 24141 elements > Info : Building graph… > [1] 57253 segmentation fault (core dumped) gmsh -3 ./demos/sphere.geo -part 3 > > -- > Docteur Ingénieur de recherche > CeMoSiS - [email protected] > Tel: +33 (0)3 68 85 02 06 > IRMA - 7, rue René Descartes > 67 000 Strasbourg > > > _______________________________________________ > gmsh mailing list > [email protected] > http://onelab.info/mailman/listinfo/gmsh -- Prof. Christophe Geuzaine University of Liege, Electrical Engineering and Computer Science http://www.montefiore.ulg.ac.be/~geuzaine Tetrahedron V, July 4-5 2016: http://tetrahedron.montefiore.ulg.ac.be Free software: http://gmsh.info | http://getdp.info | http://onelab.info _______________________________________________ gmsh mailing list [email protected] http://onelab.info/mailman/listinfo/gmsh
