Akshay Patny wrote:
Hi
Hi ALl
I read through some of the e-mails of B. Nataraj and Erik Lindahl for
similar problem on compiling of GROMACS 3.3.1 on SGI IRIX.
As my error also pointed to a problem in "gmx_fft_fftw3.c", I replaced the
'void' with 'char' in the line 150 of the file, as suggested.
I got the errors exactly the same as B. Nataraj got after doing this
modification, which is listed at
http://www.gromacs.org/pipermail/gmx-users/2006-April/020969.html
The same error is given below. I could not understand how to fix this error
and run GROMACS successfully.
Dr. Erik Lindahl wrote that: "As far as I can see that file is perfectly
valid ANSI C - there is no executable statement in the declaration section."
However, I still do not know how to fix this?
there is a double semicolon on one of the lines before it. please remove
it and retry.
Please help.
Regards
Akshay
Error is given below:
____________________________________________________________________________
cc-1241 cc: ERROR File = gmx_chi.c, Line = 1031
A declaration cannot appear after an executable statement in a block.
static real core_frac=0.5 ;
^
cc-1241 cc: ERROR File = gmx_chi.c, Line = 1032
A declaration cannot appear after an executable statement in a block.
t_pargs pa[] = {
^
cc-1241 cc: ERROR File = gmx_chi.c, Line = 1073
A declaration cannot appear after an executable statement in a block.
FILE *log;
^
cc-1241 cc: ERROR File = gmx_chi.c, Line = 1074
A declaration cannot appear after an executable statement in a block.
int natoms,nlist,naa,idum,nbin;
^
cc-1241 cc: ERROR File = gmx_chi.c, Line = 1075
A declaration cannot appear after an executable statement in a block.
t_atoms atoms;
^
cc-1241 cc: ERROR File = gmx_chi.c, Line = 1076
A declaration cannot appear after an executable statement in a block.
rvec *x;
^
cc-1241 cc: ERROR File = gmx_chi.c, Line = 1077
A declaration cannot appear after an executable statement in a block.
matrix box;
^
cc-1241 cc: ERROR File = gmx_chi.c, Line = 1078
A declaration cannot appear after an executable statement in a block.
char title[256],grpname[256];
^
cc-1241 cc: ERROR File = gmx_chi.c, Line = 1079
A declaration cannot appear after an executable statement in a block.
t_dlist *dlist;
^
cc-1241 cc: ERROR File = gmx_chi.c, Line = 1080
A declaration cannot appear after an executable statement in a block.
char **aa;
^
cc-1241 cc: ERROR File = gmx_chi.c, Line = 1081
A declaration cannot appear after an executable statement in a block.
bool bChi,bCorr,bSSHisto;
^
cc-1241 cc: ERROR File = gmx_chi.c, Line = 1082
A declaration cannot appear after an executable statement in a block.
bool bDo_rt, bDo_oh, bDo_ot, bDo_jc ;
^
cc-1241 cc: ERROR File = gmx_chi.c, Line = 1083
A declaration cannot appear after an executable statement in a block.
real dt=0, traj_t_ns;
^
cc-1241 cc: ERROR File = gmx_chi.c, Line = 1085
A declaration cannot appear after an executable statement in a block.
atom_id isize,*index;
^
cc-1241 cc: ERROR File = gmx_chi.c, Line = 1086
A declaration cannot appear after an executable statement in a block.
int ndih,nactdih,nf;
^
cc-1241 cc: ERROR File = gmx_chi.c, Line = 1087
A declaration cannot appear after an executable statement in a block.
real **dih,*trans_frac,*aver_angle,*time;
^
cc-1241 cc: ERROR File = gmx_chi.c, Line = 1088
A declaration cannot appear after an executable statement in a block.
int i,j,**chi_lookup,*xity;
^
cc-1241 cc: ERROR File = gmx_chi.c, Line = 1090
A declaration cannot appear after an executable statement in a block.
t_filenm fnm[] = {
^
cc-1241 cc: ERROR File = gmx_chi.c, Line = 1106
A declaration cannot appear after an executable statement in a block.
int npargs;
^
cc-1241 cc: ERROR File = gmx_chi.c, Line = 1107
A declaration cannot appear after an executable statement in a block.
t_pargs *ppa;
^
20 errors detected in the compilation of "gmx_chi.c".
*** Error code 1 (bu21)
*** Error code 1 (bu21)
*** Error code 1
(bu21)______________________________________________________________________
______
Akshay Patny
Graduate Research Assistant
Faser Hall 417, Department of Medicinal Chemistry
Research Institute of Pharmaceutical Sciences
University of Mississippi
University, MS 38677
E-mail: [EMAIL PROTECTED]
Tel: 662-915-1286 (office); Web: www.olemiss.edu
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David.
________________________________________________________________________
David van der Spoel, PhD, Assoc. Prof., Molecular Biophysics group,
Dept. of Cell and Molecular Biology, Uppsala University.
Husargatan 3, Box 596, 75124 Uppsala, Sweden
phone: 46 18 471 4205 fax: 46 18 511 755
[EMAIL PROTECTED] [EMAIL PROTECTED] http://folding.bmc.uu.se
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