Check previous questions to the mailing list: http://www.gromacs.org/pipermail/gmx-users/2002-January/000527.html
http://www.gromacs.org/pipermail/gmx-users/2004-February/009182.html --- Arneh Babakhani <[EMAIL PROTECTED]> wrote: > Hello GROMACS community, > > I was wondering if somebody could walk me through > the process of > calculating lipid order parameters (for a DMPC > membrane), using the > g_order analysis tool? > > I've got a 5 ns trajectory and would like to make > one of the classic > order parameter plots: > i.e. > On the y-axis: the order parameter averaged over the > entire trajectory > On the x-axis: the Carbon number, or Carbon type > (C2A on one tick, C2B > on the next tick, and so on . . . ). > > I'm a little confused in how to set up the ndx file > for this too. > > Any help at all would be much appreciated! > > Thank you for your time, > > Arneh > > > > _______________________________________________ > gmx-users mailing list gmx-users@gromacs.org > http://www.gromacs.org/mailman/listinfo/gmx-users > Please don't post (un)subscribe requests to the > list. Use the > www interface or send it to > [EMAIL PROTECTED] > Can't post? Read > http://www.gromacs.org/mailing_lists/users.php > __________________________________________________ Do You Yahoo!? Tired of spam? Yahoo! Mail has the best spam protection around http://mail.yahoo.com _______________________________________________ gmx-users mailing list gmx-users@gromacs.org http://www.gromacs.org/mailman/listinfo/gmx-users Please don't post (un)subscribe requests to the list. Use the www interface or send it to [EMAIL PROTECTED] Can't post? Read http://www.gromacs.org/mailing_lists/users.php