Alessandro Mattozzi wrote:
Hi all
I wonder if anybody has been using Pass to measure free volume: I got
these errors:
-Error: Found an odd element (B) on atom #13454. Hydrogen radius assigned.
Suggestion: Do I have to remove all the dummies?
Yes.
make an index file, it will have a suitable group for it.
-Segmentation fault
Suggestion: I use trjconv to get a pdb; is it possible that I am doing
some mistake in the conversion?
Thanx
Alessandro Mattozzi
M.Phil., Ph.D. student
Dept. of Fibre and Polymer Technology
Royal Institute of Technology
Stockholm, Sweden
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David.
________________________________________________________________________
David van der Spoel, PhD, Assoc. Prof., Molecular Biophysics group,
Dept. of Cell and Molecular Biology, Uppsala University.
Husargatan 3, Box 596, 75124 Uppsala, Sweden
phone: 46 18 471 4205 fax: 46 18 511 755
[EMAIL PROTECTED] [EMAIL PROTECTED] http://folding.bmc.uu.se
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