Dhananjay wrote:
The starting structure is a homology model.
(If you need some more details then please tell me)
well that explains it probably, the starting structure is not a good
protein structure. you can use the MD to tell you why the model falls apart.
force field : GROMOS96 43a1
--
David.
________________________________________________________________________
David van der Spoel, PhD, Assoc. Prof., Molecular Biophysics group,
Dept. of Cell and Molecular Biology, Uppsala University.
Husargatan 3, Box 596, 75124 Uppsala, Sweden
phone: 46 18 471 4205 fax: 46 18 511 755
[EMAIL PROTECTED] [EMAIL PROTECTED] http://folding.bmc.uu.se
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