Dechang Li wrote: > Dear all, > > There are three options of comm_mode: Linear, Angular and none. > The option Angular is said that "Remove center of mass translation > and rotation around the center of mass". Does it mean the option > Angular remove the translation and rotation BOTH ? yes > If I want to do a simulation such as a protein in the explicit > water, which option would be better? Or it will be the same? > Thank you for your reply. > linear. angular with PBC will give artifacts
> -- David van der Spoel, Ph.D. Molec. Biophys. group, Dept. of Cell & Molec. Biol., Uppsala University. Box 596, 75124 Uppsala, Sweden. Phone: +46184714205. Fax: +4618511755. [EMAIL PROTECTED] [EMAIL PROTECTED] http://folding.bmc.uu.se _______________________________________________ gmx-users mailing list gmx-users@gromacs.org http://www.gromacs.org/mailman/listinfo/gmx-users Please search the archive at http://www.gromacs.org/search before posting! Please don't post (un)subscribe requests to the list. Use the www interface or send it to [EMAIL PROTECTED] Can't post? Read http://www.gromacs.org/mailing_lists/users.php
