Or if can use GROMOS87 for the protein and the Berger for the lipids, correct ?
On Nov 8, 2007 12:49 PM, Erik Lindahl <[EMAIL PROTECTED]> wrote: > Hi, > > On Nov 7, 2007, at 5:40 PM, maria goranovic wrote: > > > Thanks for the help, David. Actually, I just realized I was trying to > > decide based on mailing list archives which, in some cases, are 5 > > years old. My mistake. I will use the 43a2 field for my protein. > > > > Is there any standard procedure to combine 43a2 with the berger force > > field (ffgmx) for lipids ? > > Don't do it. The berger force field is mostly derived from OPLS, so > you will (again) find it much easier to defend your choices if you mix > it with OPLS-AA/L instead. > > Cheers, > > Erik > > > _______________________________________________ > gmx-users mailing list gmx-users@gromacs.org > http://www.gromacs.org/mailman/listinfo/gmx-users > Please search the archive at http://www.gromacs.org/search before posting! > Please don't post (un)subscribe requests to the list. Use the > www interface or send it to [EMAIL PROTECTED] > Can't post? Read http://www.gromacs.org/mailing_lists/users.php > _______________________________________________ gmx-users mailing list gmx-users@gromacs.org http://www.gromacs.org/mailman/listinfo/gmx-users Please search the archive at http://www.gromacs.org/search before posting! Please don't post (un)subscribe requests to the list. Use the www interface or send it to [EMAIL PROTECTED] Can't post? Read http://www.gromacs.org/mailing_lists/users.php