> Dear Periole, > Thank you so much for your kind reply, as you suggested I will keep the > discussion on the users list. Please note that I AM GETTING PROBLEM ONLY > WHEN I AM NOT USING ANY BOX.
Please also refrain from using all-capitals. It is regarded as the email equivalent of shouting. It will get your email ignored, rather than treated with more urgency. If your proteins-are-moving apart problem is not a PBC artifact, and does not occur when you use PBC, then you have a perplexing problem. First, check your inputs again, so that you really are doing what you think you're doing. Even repeat the whole setup from scratch. The simplest explanation is user error. Mark _______________________________________________ gmx-users mailing list gmx-users@gromacs.org http://www.gromacs.org/mailman/listinfo/gmx-users Please search the archive at http://www.gromacs.org/search before posting! Please don't post (un)subscribe requests to the list. Use the www interface or send it to [EMAIL PROTECTED] Can't post? Read http://www.gromacs.org/mailing_lists/users.php