Dear all users, I want to analyze Hydrogen-bond among water molecules using "g_hbond" command. We use periodic boundary conditions in the simulation box. The question is: I don't know whether this "g_hbond" tool considers the "periodic boundary conditions", that is, whether this tool considers Hydrogen-bonds formed between BOUNDARY water molecules due to pbc. GROMACS 3.3.1 is used. Thank you!
Chunlei Wang _______________________________________________ gmx-users mailing list gmx-users@gromacs.org http://www.gromacs.org/mailman/listinfo/gmx-users Please search the archive at http://www.gromacs.org/search before posting! Please don't post (un)subscribe requests to the list. Use the www interface or send it to [EMAIL PROTECTED] Can't post? Read http://www.gromacs.org/mailing_lists/users.php