[EMAIL PROTECTED] wrote:
Hi,

I am trying to analyse the number of atom around the protein. For example, I 
want
to calculate the number of oxygen atom of water within 3A of the protein. Can
somebody tell me how to do it? Or tell me choose which commands to do it.
Many thanks in advance,

g_trjorder
g_hbond
g_mindist

Fufengliu


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--
David van der Spoel, Ph.D.
Molec. Biophys. group, Dept. of Cell & Molec. Biol., Uppsala University.
Box 596, 75124 Uppsala, Sweden. Phone:  +46184714205. Fax: +4618511755.
[EMAIL PROTECTED]       [EMAIL PROTECTED]   http://folding.bmc.uu.se
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