Andy Shelley wrote:
I am trying to simulate the flow of nitrogen over a cylinder and would
like to use gromacs. Most of the simulations seem to be done in water,
but I was wondering how to go about creating the simulation in Nitrogen.
I can create the cylinder. After that I want to try to create a shear
flow by assigning a linear velocity profile to the Nitrogen. I realize
this will probably have to be done in NEMD. Any thoughts or ideas would
be appreciated.
We don't have velocity profiles, just accelerations. It wouldn't be so
hard to add.
Andy Shelley
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David van der Spoel, Ph.D., Professor of Biology
Molec. Biophys. group, Dept. of Cell & Molec. Biol., Uppsala University.
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