Dear user:
We know that observing the sampled conformations in the subspace spanned by
the eigenvectors is a so-called two-dimensional projection(2D projection), in
2-D projection, each point represents a snapshot from the simulation, and the
distribution shows the sampled region along the first two eigenvectors during
the simulation. But I feel confounded, because I do not know to how to obtain
corresponding conformation for each point in the 2-D projection. Some papers
can show these corresponding conformation. Please help me!
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