Minnale, A file is (generally) data on a disk, of which the operating system knows where it is. Knowing where the file is depends on the inode of the file. Deleting a file is usually removing the inode, not the data. But once the inode is removed, the data can no longer be recognized as a certain file. If you write to a trajectory and you remove the inode, the data simply goes void... it's written to be forgotten.
Tsjerk On Thu, Jun 26, 2008 at 2:28 PM, minnale <[EMAIL PROTECTED]> wrote: > > Thanks for your reply, > I think you didnt get what I have asked. > I want to ask that, assume that one simulation is running, while running the > simulation By mistake although delete .trr file the simulation runs in > terminal like > > step 25258, will finish at Thu Jun 26 20:34:40 2008 > > If deleted the .trr file where trjectory information will go? > I hope you got it now. > On Thu, 26 Jun 2008 Justin A.Lemkul wrote : > >> >> >>minnale wrote: >>> >>> >>>Hi all, >>> I want to know one thing that if delete .trr file, still job will be >>> running (submitted job), where will go all these trajectories? Regarding >>> .edr , .log the information will go to respective files by update. >>> Can anyone tell that where trajectories will go, if those go >>> somewhere else, is there anyway to retrieve this trajectories. >>>Thanks in advance. >>> >>> >> >>I'm not really sure what you mean. If you delete a file, it is lost. >> Lesson learned in being careful. The simulation will continue to run, >> writing to the .log, .edr, and .xtc files, but it will not regenerate or >> recover your .trr file. >> >>-Justin >> >>> >>>Share Khan >>> <http://adworks.rediff.com/cgi-bin/AdWorks/click.cgi/www.rediff.com/signature-home.htm/[EMAIL >>> PROTECTED]/2203082_2195489/2198089/1?PARTNER=3&OAS_QUERY=null> >>> >>>------------------------------------------------------------------------ >>> >>>_______________________________________________ >>>gmx-users mailing list [email protected] >>>http://www.gromacs.org/mailman/listinfo/gmx-users >>>Please search the archive at http://www.gromacs.org/search before posting! >>>Please don't post (un)subscribe requests to the list. Use the www >>> interface or send it to [EMAIL PROTECTED] >>>Can't post? Read http://www.gromacs.org/mailing_lists/users.php >> >>-- ======================================== >> >>Justin A. Lemkul >>Graduate Research Assistant >>Department of Biochemistry >>Virginia Tech >>Blacksburg, VA >>jalemkul[at]vt.edu | (540) 231-9080 >>http://www.bevanlab.biochem.vt.edu/Pages/Personal/justin >> >>======================================== >> > > > > _______________________________________________ > gmx-users mailing list [email protected] > http://www.gromacs.org/mailman/listinfo/gmx-users > Please search the archive at http://www.gromacs.org/search before posting! > Please don't post (un)subscribe requests to the list. Use the > www interface or send it to [EMAIL PROTECTED] > Can't post? Read http://www.gromacs.org/mailing_lists/users.php > -- Tsjerk A. Wassenaar, Ph.D. Junior UD (post-doc) Biomolecular NMR, Bijvoet Center Utrecht University Padualaan 8 3584 CH Utrecht The Netherlands P: +31-30-2539931 F: +31-30-2537623 _______________________________________________ gmx-users mailing list [email protected] http://www.gromacs.org/mailman/listinfo/gmx-users Please search the archive at http://www.gromacs.org/search before posting! Please don't post (un)subscribe requests to the list. Use the www interface or send it to [EMAIL PROTECTED] Can't post? Read http://www.gromacs.org/mailing_lists/users.php
