On Sat, 6 Sep 2008 04:59:54 -0400
"Myunggi Yi" <[EMAIL PROTECTED]> wrote:
Dear users,
I found MARTINI CG force fields.
That is the best choice you could make! :))
http://md.chem.rug.nl/~marrink/MARTINI/Parameters.html
Then dig a bit in the website and you'll find everything to start a
simulation. topologies, mdp, coordinates ...
Heve fun,
XAvier
On Thu, Sep 4, 2008 at 3:14 PM, Xavier Periole <[EMAIL PROTECTED]> wrote:
On Thu, 4 Sep 2008 14:59:55 -0400
"Myunggi Yi" <[EMAIL PROTECTED]> wrote:
Dear gmx users,
I'd like to run simulations with coarse grained model lipid bilayer.
Where can I find the force field for coarse grain POPC lipid or
equilibrated
bilayer coordinates?
You should first choose a coarse grained model for lipids that you found
appropriate in literature and then the authors would probably give a link
to the force field in the paper. If not you can always contact them.
--
Best wishes,
Myunggi Yi
==================================
KLB 419
Institute of Molecular Biophysics
Florida State University
Tallahassee, FL 32306
Office: (850) 645-1334
http://www.scs.fsu.edu/~myunggi <http://www.scs.fsu.edu/%7Emyunggi>
[EMAIL PROTECTED]
-----------------------------------------------------
XAvier Periole - PhD
Molecular Dynamics Group / NMR and Computation
University of Groningen
The Netherlands
-----------------------------------------------------
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--
Best wishes,
Myunggi Yi
==================================
KLB 419
Institute of Molecular Biophysics
Florida State University
Tallahassee, FL 32306
Office: (850) 645-1334
http://www.scs.fsu.edu/~myunggi
[EMAIL PROTECTED]
-----------------------------------------------------
XAvier Periole - PhD
Molecular Dynamics Group / NMR and Computation
University of Groningen
The Netherlands
-----------------------------------------------------
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