Are you sure this will be done automaticaly if you'll procide gromacs with an output file called filename.trj? There is also the option of converting into PDB: "trjconv -f traj.xtc -o trajtraj.pdb -s coordinates.gro". omer.
Koby Levy research group, Weizmann Institute of Science. http://www.weizmann.ac.il/sb/faculty_pages/Levy/ On Mon, Sep 8, 2008 at 20:14, ranqi zhu <[EMAIL PROTECTED]> wrote: > Hi, Everyone, > > I just want to use the clustering tool in amber which only take trj file. > > Thanks > > -Ranqi > > ------------------------------ > Want to do more with Windows Live? Learn "10 hidden secrets" from Jamie. Learn > Now<http://windowslive.com/connect/post/jamiethomson.spaces.live.com-Blog-cns!550F681DAD532637!5295.entry?ocid=TXT_TAGLM_WL_domore_092008> > > _______________________________________________ > gmx-users mailing list gmx-users@gromacs.org > http://www.gromacs.org/mailman/listinfo/gmx-users > Please search the archive at http://www.gromacs.org/search before posting! > Please don't post (un)subscribe requests to the list. Use the > www interface or send it to [EMAIL PROTECTED] > Can't post? Read http://www.gromacs.org/mailing_lists/users.php >
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