Thanks Justin for your prompt response, I have issued the command trjconv -f 5ns_trj.xtc -skip 1000 -o every1000steps.xtc, means the output trajectory will contain only 1000th step interval values till 5ns, excluding remaining. How can I know that whether generated trajectory file right or wrong? Thanks alot for any suggestion. On Sat, 13 Sep 2008 Justin A.Lemkul wrote : > > >minnale wrote: >> Hi all, >>I have run the simulation with 100 steps interval in .log file till 5ns, now >>I want to extract the new trajectory file should conatin with 1000 steps >>inerval trajectories excluding remain steps. I want new trajectory like 1000, >>2000, 3000, 4000, 5000,....... steps. >>Could anyone tell me detail suggestion please. >>Thanks in advance. >> > >Trajectory manipulations are done with trjconv. Have a look at trjconv -skip. > >-Justin > >> >> >>Ebay >><http://adworks.rediff.com/cgi-bin/AdWorks/click.cgi/www.rediff.com/signature-default.htm/[EMAIL >> PROTECTED]/2401775_2394076/2397136/1?PARTNER=3&OAS_QUERY=null> >> >> >>------------------------------------------------------------------------ >> >>_______________________________________________ >>gmx-users mailing list gmx-users@gromacs.org >>http://www.gromacs.org/mailman/listinfo/gmx-users >>Please search the archive at http://www.gromacs.org/search before posting! >>Please don't post (un)subscribe requests to the list. Use the www interface >>or send it to [EMAIL PROTECTED] >>Can't post? Read http://www.gromacs.org/mailing_lists/users.php > >-- ======================================== > >Justin A. Lemkul >Graduate Research Assistant >Department of Biochemistry >Virginia Tech >Blacksburg, VA >jalemkul[at]vt.edu | (540) 231-9080 >http://www.bevanlab.biochem.vt.edu/Pages/Personal/justin > >========================================
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