xianghong qi wrote:
Hi, everyone:
I am a beginner for Gromacs. I am using the latest version Gromacs 4.0
beta1. Then I follow the tutorial part: Introduction to MD
<http://md.chem.rug.nl/education/mdcourse/> by the Groningen group.
Compiling is ok, but I always get the Segmentation fault when I use
command : genbox -cp minimized_box.gro -cs spc216.gro -o
minimized_water.gro -p aki.top. Also I get the same problem when i try
other exercises. Does anyone has same problem like me ? or can anyone
give me a hint for that? Thanks in advance.
It sounds like your installation is faulty. What architecture are you running
on? What compilers did you use?
If you are just starting out, it is probably better to use an official release
of Gromacs (the latest being 3.3.3), since 4.0beta1 is still in development.
-Justin
-Xianghong Qi
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University of Pittsburgh
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Justin A. Lemkul
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Virginia Tech
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