Dear All,
I have few questions about g_dipoles, which are not explained in the manual 
(these questions are probably mostly to developers):
1) What method is used to calculate the epsilon? Is there a reference which can 
be cited?
2) I can't figure out the purpose of the option -enx. When I supply edr file 
with this option the value of epsilon changes slightly and options -slab and -d 
stop working. Option -d makes no effect at all, the file dipdist.xvg does not 
appear.
With -slab the resulting file slab.xvg always contains zeros regardless
of the system. Without -enx these options work as expected. What is the reason 
of these weird side effects? Is this a bug or a feature?
3) Many options are undocumented at all (-adip, -dip3d, -cmap, -q, -slab). It 
is easy to deduce what -slab does, but what on earth is -adip or -cmap? Is it 
possible to update the manual?

Thanks in advance!

Semen


      
_______________________________________________
gmx-users mailing list    gmx-users@gromacs.org
http://www.gromacs.org/mailman/listinfo/gmx-users
Please search the archive at http://www.gromacs.org/search before posting!
Please don't post (un)subscribe requests to the list. Use the 
www interface or send it to gmx-users-requ...@gromacs.org.
Can't post? Read http://www.gromacs.org/mailing_lists/users.php

Reply via email to