Alexander Malafeev wrote:


2009/2/12 Mark Abraham <mark.abra...@anu.edu.au <mailto:mark.abra...@anu.edu.au>>

    Alexander Malafeev wrote:

        Hi, Dear Gromacs users, I try to compile gromacs template by
        typing "make template" as said in gromacs FAQ, but I have a lot
        of errors.


    You still need to have used "configure" to generate a proper
    Makefile. All of these errors are happening because you haven't told
    the C preprocessor where to find these include files... You should
    also follow the instructions about adding your file's name to the
    right part of the Makefile.am and Makefile.in.

    Mark
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But where I can find proper configure file and mentioned instructions?

The configure file is the same one you use when installing. There are some instructions in the README in the share/template directory, but it's quite out of date. There is a better one in src/contrib.

Please describe template compilation in details, I can't find detailed manual in documentation.
P.S Gromacs version 3.3

There isn't any. I recommend you pick the utility program closest to what you want to do, copy and rename its files in src/tools to what you want to call it. Edit the Makefile.in and Makefile.am files, adding your tool's name everywhere you see the original tool's name, preserving the local pattern of formatting. Run configure in the top-level directory. Now building gromacs will attempt to build and install your utility. You can go to src/tools and issue the right make command if you want to just build your utility during development, but you will not be able to link until the rest of the libraries and such are built. Once that's all working, *then* go and change the code for the new tool to do what you want it to do.

Mark
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