What do you mean by directions?
in your topology file you have to include the file martini_v2.1.itp
as you would do for any other force field!
On Feb 16, 2009, at 11:07 AM, bhf70 wrote:
It is possible to set an example ?
bhf70 wrote:
> Could you tell me, please.
>
> What's directions need the programm pdb2gmx to use external .itp
files,
> for example martini_v2.1.itp (Coarse Grained Force Field)?
>
> How is it to do ?
There should be instructions accompanying that force field wherever
you
got it from.
There's some general information here
http://wiki.gromacs.org/index.php/Include_File_Mechanism
Mark
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