Hello Everyone, Pls tell me after doing simulation, which command should i use ,so that i can get all the pdb files of whole trajectory. I know the command where i can get one pdb file at a time, i.e. trjconv -f *_vac_md_1ns.xtc -s *_vac_md_1ns.tpr -dt 20 -b 0 -e 300 -o _vac_md_1ns_300.pdb trjconv -f *_vac_md_1ns.xtc -s *_vac_md_1ns.tpr -o *_vac_md_1ns_dump_300.pdb -dump 300 This command will give me pdb file for 300ps file where my total simulation is for 1 ns. but how to get whole pdb files for the simulation of 1ns where my dt=0.2 This is a very silly problem. But Please help me out.
With Regards Bhawana
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