Jacob Spooner wrote:
It would be very advantageous for me to have a g_clustsize that
could implement the Jarvis-Patrick method instead of single linkage.
Would this be very difficult to achieve? Or would it be easy enough to
use source code from g_cluster and do a sort of transplant? Thank
you for you help
Maybe these two programs could be merged altogether, or at least the
double code combined in a separate source file or so. Note that it is a
good idea to check whether the algorithms have been implemented
correctly anyway.
David van der Spoel <sp...@xray.bmc.uu.se> 5/19/2009 10:06 PM >>>
Jacob Spooner wrote:
I am planning on using g_clustsize to do some condensation analysis. I looked
at g_cluster and see that it has a number of method options including single
linkage and jarvis patrick. Is it true that g_clustsize has only the single
linkage option? I took a look at the source code but this type of thing is not
my strength.
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David van der Spoel, Ph.D., Professor of Biology
Molec. Biophys. group, Dept. of Cell & Molec. Biol., Uppsala University.
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