Hello,
I am running the pdb2gmx command for a homodimer protein with SF4 (a 
ferro-sulphur cluster) ligand but it fails to generate the .gro file. A error 
is coming SF4 not found in residue topology database. I have trired all 
the different force fields. Can anybody please tell me how to correct the 
error? How to modify the rtp file to consider the ligand? 

Subarna thakur
University of north bengal


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