Chih-Ying Lin wrote:


Hi
I want to calculate the pressure and the energy for the system.


my .mdp file is as follows; writing out the energy and coordinates per 1000 
steps.

nstenergy = 1000   ; Writing out energy information every step
nstxtcout = 1000   ; Writing coordinates every step


After entering g_energy command,
the pressure and the energy are calculated.

Are the pressure and the energy calculated for the instantanous pressure and energy
on the time point of the 1000th, 2000th ....... time step ?

Or, the pressure and the energy are averagely calculated over the time period 0-1000, 1001-2000.....time steps?
Which one is true?

Both. See Appendix C.

Mark
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