nikhil damle wrote:
Hi,

Thanks a lot for the reply. I am submitting ATP crds as ATP.pdb to pdb2gmx and receive the error as "No atoms found in pdb file ATP.pdb" I converted HETATM tag to ATOM tag. Still same error msg. Please find ATP.pdb file attached herewith.

You've broken the PDB format, which encodes the information in fixed-column style. See http://www.wwpdb.org/documentation/format32/v3.2.html

Mark
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