Greetings all,
Let me preface this by stating I'm new at MD simulation. I am trying
to perform a simulation which involves non-bonded copper atoms,
amongst other things. I'm making use of the Lennard-Jones potential
to describe the non-bonded interactions between them, and I've input
the parameters in the ff*nb.itp file after ensuring Cu was defined in
the ffgmx.atp file. I use x2top to generate the topology file, but
the program stops on a fatal error telling me "No forcefield type for
atom Cu (841) with 0 bonds". Can any of you out there offer any
advice on the cause of said error? Thus far my troubleshooting has
failed.
Thanks in advance for your assistance.
Matt
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