Hi hazizian, That information is stored in the file you get with the option -sc. To get percentages you have to use awk or something along thos lines.
Cheers, Tsjerk On Tue, Jul 14, 2009 at 5:47 AM, hazizian<haziz...@razi.tums.ac.ir> wrote: > > Hi > I have a question about do_dssp program.is it posible to define the amount > of residus (the percentage) which have specific secondry structure, apart > from the graphic file? if yes what is the the command? > Thanks > -- > Tehran University of Medical Sciences > www.tums.ac.ir > > > -- > This message has been scanned for viruses and > dangerous content by MailScanner, and is > believed to be clean. > > _______________________________________________ > gmx-users mailing list gmx-us...@gromacs.org > http://lists.gromacs.org/mailman/listinfo/gmx-users > Please search the archive at http://www.gromacs.org/search before posting! > Please don't post (un)subscribe requests to the list. Use the > www interface or send it to gmx-users-requ...@gromacs.org. > Can't post? Read http://www.gromacs.org/mailing_lists/users.php > -- Tsjerk A. Wassenaar, Ph.D. Junior UD (post-doc) Biomolecular NMR, Bijvoet Center Utrecht University Padualaan 8 3584 CH Utrecht The Netherlands P: +31-30-2539931 F: +31-30-2537623 _______________________________________________ gmx-users mailing list gmx-users@gromacs.org http://lists.gromacs.org/mailman/listinfo/gmx-users Please search the archive at http://www.gromacs.org/search before posting! Please don't post (un)subscribe requests to the list. Use the www interface or send it to gmx-users-requ...@gromacs.org. Can't post? Read http://www.gromacs.org/mailing_lists/users.php
