Alan wrote:
Hi list, does anyone have an example (input pdb, gmx commands and
md.mdp for example) to test gromacs with and without openmm?
The case I use here (with explicit water) didn't show me any speed up
(comparing with mpirun -c 2 mdrun_mpi...).
I am using Mac Leopard 10.5.7 with Cuda drivers and gromacs 4.0.5
This would be expected if you read the OpenMM README.... or see
http://oldwiki.gromacs.org/index.php/OpenMM_GROMACS
Mark
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