hi, i'm simulating a membrane protein in DPPC bilayer. here i'm using 
inflategro perl script. just after the first run when i'm running grompp to 
minimize it i have found a large force on a phenylalanin atom which is well 
over 



1015   

 

Now what to do with this one?  I had a view of that particular atom through
pymol which is an Oxygen (CO). Right now I’m a little anxious that if I keep
this and go on it’ll affect the future steps. Any suggestions regarding this
will be very encouraging.
Thank You
Shamik






      Yahoo! recommends that you upgrade to the new and safer Internet Explorer 
8. http://downloads.yahoo.com/in/internetexplorer/
_______________________________________________
gmx-users mailing list    gmx-users@gromacs.org
http://lists.gromacs.org/mailman/listinfo/gmx-users
Please search the archive at http://www.gromacs.org/search before posting!
Please don't post (un)subscribe requests to the list. Use the 
www interface or send it to gmx-users-requ...@gromacs.org.
Can't post? Read http://www.gromacs.org/mailing_lists/users.php

Reply via email to