Samik Bhattacharya wrote:
hi i have completed the process of simulating a protein in a lipid
environmant... now in the analysis part i have generated some graphical
representations of the angle, RMSD etc. but from that i cant conclude
about the success of the simulation.....is there any thing (research
papers, namely) whcih can provide ideas about how to reach conclusion
from the analysed data.....really need some help regarding this matter....
Everyone's conclusions are going to be different based on the question they are
trying to answer. The necessary analysis should be derived from this question.
Such decisions should be made before running the MD :)
-Justin
Thank You
Shamik
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--
========================================
Justin A. Lemkul
Ph.D. Candidate
ICTAS Doctoral Scholar
Department of Biochemistry
Virginia Tech
Blacksburg, VA
jalemkul[at]vt.edu | (540) 231-9080
http://www.bevanlab.biochem.vt.edu/Pages/Personal/justin
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