You should put the cflags on the configure command line, I use:
configure --enable-debug CFLAGS="-O0 -msse2 -g"

Berk

Date: Thu, 24 Sep 2009 16:51:45 +0300
From: inons...@tau.ac.il
To: gmx-users@gromacs.org
Subject: [gmx-users] Re: Re: help with gmx C source code



    


        
    
    
        
            Hi Alex! (and everyone else)

        

        
            

        

        
            I
        

        
            Re: help with gmx C source code
        
        
            set the CFLAGS environment variable with

        

        CFLAGS="-O0 -g3"

        
            and then installed, using
        

        
            ./configure

            make

            make install

        

        
            but it seems that I'm still doing something wrong, because when I do
        

        
            gdb mdrun
        

        
            there appear to still be no debugging symbols in the program:

        

        
            (gdb) file mdrun

            Reading symbols from /usr/bin/mdrun...(no debugging symbols 
found)...done.

            (gdb) file mdrun_d

            Reading symbols from /usr/bin/mdrun_d...(no debugging symbols 
found)...done.
        

        
            

        

        
            Do you have any idea what I might be doing wrong?
        

        
            Thanks for all the help,

        

        
            --

            Inon   Sharony

            ינון     שרוני

            +972(3)6407634

            atto.TAU.ac.IL/~inonshar

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