Dear Mark, You mean that I should consider a configuration with the lowest total energy for docking studies..Please clarify and suggest me.
Thanks, Ram On Thu, Oct 22, 2009 at 3:56 AM, Mark Abraham <mark.abra...@anu.edu.au> wrote: > ram bio wrote: >> >> Dear Justin, >> >> Thanks for the suggestion and advice. >> As i have used a modelled protein and want to obtain the lowest energy >> configuration of the protein by doing dynamics, > > That's all very well, but what will that give you other than a set where the > partition of total energy into potential and kinetic was skewed one way? > > Mark > _______________________________________________ > gmx-users mailing list gmx-users@gromacs.org > http://lists.gromacs.org/mailman/listinfo/gmx-users > Please search the archive at http://www.gromacs.org/search before posting! > Please don't post (un)subscribe requests to the list. Use the www interface > or send it to gmx-users-requ...@gromacs.org. > Can't post? Read http://www.gromacs.org/mailing_lists/users.php > _______________________________________________ gmx-users mailing list gmx-users@gromacs.org http://lists.gromacs.org/mailman/listinfo/gmx-users Please search the archive at http://www.gromacs.org/search before posting! Please don't post (un)subscribe requests to the list. Use the www interface or send it to gmx-users-requ...@gromacs.org. Can't post? Read http://www.gromacs.org/mailing_lists/users.php
