parthi...@ncbs.res.in wrote:
Hi
I have constructed the bilayer with protein molecule in VMD.
Can any one tell how to start MD from here.
Follow the methods of whichever tutorial you learned from :-)
the initial step - pdb2gmx is not working for this complex(pdb+membrane)
We're not omniscient... tell us what you did, what you expected, what
you saw and why you think it was not working :-)
Mark
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