Hi, Of previous discussions on the list and the wiki I conclude one can do implicit solvent simulations in GROMACS with the latest git version, but that for the moment it is rather slow. I would like to test something and it is not really a problem that the code is slow. So I guess I could use GROMACS for this. I would like to run on a protein with oplsaa. Is there someone here that successfully did a protein simulation in GROMACS with implicit solvent and willing to explain the procedure and share the parameters used (especially force field).
cheers, Servaas -- gmx-users mailing list gmx-users@gromacs.org http://lists.gromacs.org/mailman/listinfo/gmx-users Please search the archive at http://www.gromacs.org/search before posting! Please don't post (un)subscribe requests to the list. Use the www interface or send it to gmx-users-requ...@gromacs.org. Can't post? Read http://www.gromacs.org/mailing_lists/users.php
