but genion only accepts one type of ion, how can we insert different types?
On Tue, May 18, 2010 at 3:38 PM, Justin A. Lemkul <jalem...@vt.edu> wrote: > > > tahereh tekieh wrote: > >> dear friends >> i want to simulate a water medium in which 5 types of different ions flow >> in it. how can i do that with gromacs? >> thanks >> >> > Assuming they are monoatomic, you can use genion after you have added > water. If they are polyatomic, use genbox -ci -nmol (before filling the box > with water). > > -Justin > > -- > ======================================== > > Justin A. Lemkul > Ph.D. Candidate > ICTAS Doctoral Scholar > MILES-IGERT Trainee > Department of Biochemistry > Virginia Tech > Blacksburg, VA > jalemkul[at]vt.edu | (540) 231-9080 > http://www.bevanlab.biochem.vt.edu/Pages/Personal/justin > > ======================================== > -- > gmx-users mailing list gmx-users@gromacs.org > http://lists.gromacs.org/mailman/listinfo/gmx-users > Please search the archive at http://www.gromacs.org/search before posting! > Please don't post (un)subscribe requests to the list. Use the www interface > or send it to gmx-users-requ...@gromacs.org. > Can't post? Read http://www.gromacs.org/mailing_lists/users.php >
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