Hi,Which tool(s) is/are useful? I don't have any idea for this problem.Thank you
you zou wrote:
> Hi again,
>
> Sorry, in "REMARK 470" there is:
>
> REMARK 470
>
> REMARK 470 MISSING ATOM
>
> REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER;
>
> REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER;
>
> REMARK 470 I=INSERTION CODE):
>
> REMARK 470 M RES CSSEQI ATOMS
>
> REMARK 470 SER A 2 OG
>
> REMARK 470 GLN A 678 CA C O &nbs
> p; CB CG CD OE1 NE2
>
> REMARK 470 SER B 2 OG
>
> REMARK 470 GLY B 679 CA C O
>
> This means there are missing atoms. Is it possible to add these atoms
> from other residue what are SER and GLN and GLY?( Copy and Paste OG from
> other SER for example?) I think after EM these are fixed, it is true?
>
If you have several missing atoms you will have to use some external tool(s) to
re-create these residues. Using cute tricks to build back one atom is easy
enough, but re-creating a fragmented structure is much easier using tools
designed for the task.
-Justin
_________________________________________________________________
Hotmail: Trusted email with powerful SPAM protection.
https://signup.live.com/signup.aspx?id=60969--
gmx-users mailing list gmx-users@gromacs.org
http://lists.gromacs.org/mailman/listinfo/gmx-users
Please search the archive at http://www.gromacs.org/search before posting!
Please don't post (un)subscribe requests to the list. Use the
www interface or send it to gmx-users-requ...@gromacs.org.
Can't post? Read http://www.gromacs.org/mailing_lists/users.php
