Very easy. Just forget about those options: g_msd
Vitaly > Hi gromacs users > > I did simulation of pr-dna by gromacs. I want to obtain diffusion coefficent > of pr to dna. I raed manual (g_msd) in which there are diffusion > coefficent only for 1 and 2 dimension as follows respectively : > > -type : Compute diffusion coefficient in one direction: no, x, y or z > > -lateral : Calculate the lateral diffusion in a plane perpendicular to: no, > x, y or z > how to use g_msd for calculation of diffusion coeffcient in 3D. > > Thanks a lot in advance. -- gmx-users mailing list gmx-users@gromacs.org http://lists.gromacs.org/mailman/listinfo/gmx-users Please search the archive at http://www.gromacs.org/search before posting! Please don't post (un)subscribe requests to the list. Use the www interface or send it to gmx-users-requ...@gromacs.org. Can't post? Read http://www.gromacs.org/mailing_lists/users.php
