> > 1- Actually since I was focusing on rdf for C-C I didnt explain my > > understanding from that post well. Anyway, I have only C and H in the > > system and no protein. You mean I have to make separate groups of C > and > > H for all polymer chains by hand? I trying to find a more smart way > of > > doing this.. for big polymers doing this by hand is really awful.
No need to do anything by hand there, use make_ndx Catch ya, Dr. Dallas Warren Medicinal Chemistry and Drug Action Monash Institute of Pharmaceutical Sciences, Monash University 381 Royal Parade, Parkville VIC 3010 dallas.war...@monash.edu +61 3 9909 9304 --------------------------------- When the only tool you own is a hammer, every problem begins to resemble a nail. -- gmx-users mailing list gmx-users@gromacs.org http://lists.gromacs.org/mailman/listinfo/gmx-users Please search the archive at http://www.gromacs.org/Support/Mailing_Lists/Search before posting! Please don't post (un)subscribe requests to the list. Use the www interface or send it to gmx-users-requ...@gromacs.org. Can't post? Read http://www.gromacs.org/Support/Mailing_Lists
