----- Original Message ----- From: Ramachandran G <gtr...@gmail.com> Date: Tuesday, September 14, 2010 12:39 Subject: [gmx-users] atom type parameters To: gmx-users@gromacs.org
> Dear gmx-users: > I am trying to get the topology for a chromophore exist in the Green > fluoresent protein. Although to some extent i got success in building the > parameters in the 'ff*.rtp' file, > i got struck in building 'atom type parameter' ( ff*.atp). I am trying to use > Charmm force field. Can anyone help me. Thank you. Your request is a bit open-ended... You will need a thorough knowledge of chapter 5 of the manual. People may be able to help you if you show what you did, explain what you wanted and why you think it didn't work. Mark
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