shahab shariati wrote:
Hi gromacs users
In gromacs manual, in appendix section, for every tool, in Files
section, there are input and output files needed for analysis. but in
Other options section, there are some things that I don't understand.
Is third column of Other opthions default values?
Yes.
In third column of Other opthions, somewhen, yes or no is seen. What
does yes mean? What does no mean?
Yes means the option is applied, no means it is not. It is a simple boolean
condition. For instance, with editconf, using "editconf -c" means the solute is
centered, "editconf -noc" means it is not.
-Justin
any help will highly appreciated.
--
========================================
Justin A. Lemkul
Ph.D. Candidate
ICTAS Doctoral Scholar
MILES-IGERT Trainee
Department of Biochemistry
Virginia Tech
Blacksburg, VA
jalemkul[at]vt.edu | (540) 231-9080
http://www.bevanlab.biochem.vt.edu/Pages/Personal/justin
========================================
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