Quoting Rossella Noschese <[email protected]>: > Hi all, I'm trying to install gromacs.4.5.3 on fedora 13. > I followed the instruction on the website, I completed my make install and > this was the output: > GROMACS is installed under /usr/local/gromacs. > Make sure to update your PATH and MANPATH to find the > programs and unix manual pages, and possibly LD_LIBRARY_PATH > or /etc/ld.so.conf if you are using dynamic libraries. > > Please run "make tests" now to verify your installation. > > If you want links to the executables in /usr/local/bin, > you can issue "make links" now. > > Since I understood I could set my environment later, I directly complete my > make links. > Then I added in my .bashrc the line: > source /usr/local/gromacs/bin/GMXRC.bash > > and it was added to mi $PATH and also my $MANPATH seems to be right > (/usr/local/gromacs/share/man:) > > When I type GMXRC in the shell it comes: > [rosse...@topolone ~]$ GMXRC > /usr/local/gromacs/bin/GMXRC: line 35: return: can only `return' from a > function or sourced script > /usr/local/gromacs/bin/GMXRC: line 44: CSH:: command not found > /usr/local/gromacs/bin/GMXRC.csh: line 8: syntax error near unexpected token > `setenv' > /usr/local/gromacs/bin/GMXRC.csh: line 8: `if (! $?LD_LIBRARY_PATH) setenv > LD_LIBRARY_PATH ""' > > Is there anyone that could help me? >
You don't run GMXRC directly, you have to "source GMXRC," but since you've already done that in your .bashrc, there's no need to do it again. -Justin ======================================== Justin A. Lemkul Ph.D. Candidate ICTAS Doctoral Scholar MILES-IGERT Trainee Department of Biochemistry Virginia Tech Blacksburg, VA jalemkul[at]vt.edu | (540) 231-9080 http://www.bevanlab.biochem.vt.edu/Pages/Personal/justin ======================================== -- gmx-users mailing list [email protected] http://lists.gromacs.org/mailman/listinfo/gmx-users Please search the archive at http://www.gromacs.org/Support/Mailing_Lists/Search before posting! Please don't post (un)subscribe requests to the list. Use the www interface or send it to [email protected]. Can't post? Read http://www.gromacs.org/Support/Mailing_Lists
