Dear All, I have the following error, for both mpi and normal mdrun modes. I tried both using a pull group for the first time, but when the error persisted, went back and used data/md.mdp files which I know work as a test and get the same errors.
> > > > [anode27:16555] *** Process received signal *** > > [anode27:16555] Signal: Segmentation fault (11) > > [anode27:16555] Signal code: Address not mapped (1) > > [anode27:16555] Failing at address: 0x2b56a416a530 > > [anode27:16555] [ 0] /lib/libpthread.so.0(+0xf010) [0x2b5687981010] > > [anode27:16555] [ 1] > /home/ubelix/l_insel_ria/l_watkins/lib/libgmx_mpi_d.so.6(+0x20303c) > [0x2b56867d603c] > > [anode27:16555] *** End of error message *** and then a complete core dump. If I run an em , it runs, but does not do anything (start=finish). I had installed the newest version 4.5.3 a few weeks back, and just realized something has gone wrong, as I used em's to test quickly, but only looked to see if it gave the output files (I mean they were the correct sizes). Does anyone know how to fix this? Sincerely Stephan Watkins -- GMX.ch - Schweizer FreeMail-Dienst mit über 800.000 Mitgliedern E-Mail & mehr! Kostenlos: http://portal.gmx.net/de/go/chfreemail -- gmx-users mailing list gmx-users@gromacs.org http://lists.gromacs.org/mailman/listinfo/gmx-users Please search the archive at http://www.gromacs.org/Support/Mailing_Lists/Search before posting! Please don't post (un)subscribe requests to the list. Use the www interface or send it to gmx-users-requ...@gromacs.org. Can't post? Read http://www.gromacs.org/Support/Mailing_Lists
