Hi Mohsen, for a start, it is always a good idea to read the help text of a command you are interested in, or to check the most recent version of the manual. Using Gromacs 4.5
g_wham -h will guide you to a JCTC paper about g_wham, which is a nice starting point. Check out this paper as well as the references therein! Also Google is your friend here: http://pubs.acs.org/doi/abs/10.1021/ct100494z http://onlinelibrary.wiley.com/doi/10.1002/jcc.540130812/pdf Carsten On Dec 14, 2010, at 9:20 AM, mohsen ramezanpour wrote: > Dear All > > What is the algorithm of g-WHAM? > in the other words ,what is the weighted histogeram analysis method? > Thanks in advance for your reply > Mohsen > > -- > gmx-users mailing list gmx-users@gromacs.org > http://lists.gromacs.org/mailman/listinfo/gmx-users > Please search the archive at > http://www.gromacs.org/Support/Mailing_Lists/Search before posting! > Please don't post (un)subscribe requests to the list. Use the > www interface or send it to gmx-users-requ...@gromacs.org. > Can't post? Read http://www.gromacs.org/Support/Mailing_Lists -- Dr. Carsten Kutzner Max Planck Institute for Biophysical Chemistry Theoretical and Computational Biophysics Am Fassberg 11, 37077 Goettingen, Germany Tel. +49-551-2012313, Fax: +49-551-2012302 http://www.mpibpc.mpg.de/home/grubmueller/ihp/ckutzne -- gmx-users mailing list gmx-users@gromacs.org http://lists.gromacs.org/mailman/listinfo/gmx-users Please search the archive at http://www.gromacs.org/Support/Mailing_Lists/Search before posting! Please don't post (un)subscribe requests to the list. Use the www interface or send it to gmx-users-requ...@gromacs.org. Can't post? Read http://www.gromacs.org/Support/Mailing_Lists