Erik Marklund skrev 2010-12-18 21.15:
leila karami skrev 2010-12-18 16.52:
Dear Erik

there are several hb->per->pHist in gmx_hbond.c.

please say me exactly in which part of the gmx_hbond.c file if-statement should be placed?


If I install gromacs 4.5.2 or 4.5.3, is there not this problem (segmentation fault)?
Sorry, forgot to answer this one.

I could have a look, but so could you. I would *think* that 4.5.3 is ok in this respect. If you checkout the release-4-5-patches from git.gromacs.org you're definitely safe.

--
Leila Karami
Ph.D. student of Physical Chemistry
K.N. Toosi University of Technology
Theoretical Physical Chemistry Group

As I said: "There's a call to clearPshift in do_merge which causes a segfault". Theres only one call to clearPshift in do_merge as far as I can remember.



--
-----------------------------------------------
Erik Marklund, PhD student
Dept. of Cell and Molecular Biology, Uppsala University.
Husargatan 3, Box 596,    75124 Uppsala, Sweden
phone:    +46 18 471 4537        fax: +46 18 511 755
er...@xray.bmc.uu.se    http://folding.bmc.uu.se/

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