Hello, I am trying to calculate number of hydrogen bond (O-H---CL)in my system.
I use the following command g_hbond -f 3.trr -s 3.tpr -n hbond18.ndx -nonitacc -num Output file hbnum.xvg shows zero number of hydorgen bond. Can you tell me why its showing zero no. A strong peak is found in rdf between H and CL at 2.0 A. I am using Gromacs 4.0.7 version. Nilesh -- gmx-users mailing list gmx-users@gromacs.org http://lists.gromacs.org/mailman/listinfo/gmx-users Please search the archive at http://www.gromacs.org/Support/Mailing_Lists/Search before posting! Please don't post (un)subscribe requests to the list. Use the www interface or send it to gmx-users-requ...@gromacs.org. Can't post? Read http://www.gromacs.org/Support/Mailing_Lists
