No, it calculates with respect to the positions atom. but I want to calculate the RMSD bonds (A˚ ) and RMSD angles (o).
2011/10/4 Mark Abraham <mark.abra...@anu.edu.au> > On 4/10/2011 7:05 PM, ahmet yıldırım wrote: > > any hints? :( > > > You didn't find something useful in the section titled "Root mean square > deviations in structure"? > > Mark > > > 03 Ekim 2011 22:32 tarihinde ahmet yıldırım <ahmedo...@gmail.com> yazdı: > >> I look at chapter 8 but I didnt found that I want. can you give a hint? >> Thanks >> >> >> 2011/10/3 Mark Abraham <mark.abra...@anu.edu.au> >> >>> On 3/10/2011 10:29 PM, ahmet yıldırım wrote: >>> >>>> Dear users, >>>> >>>> How can I calculate the RMSD bonds (A˚ ) and RMSD angles (o)? >>>> >>> >>> Please start your search in chapter 8 of the manual, and consider doing >>> some tutorial material. Someone is likely to have covered some similar >>> procedures. >>> >>> Mark >>> -- >>> gmx-users mailing list gmx-users@gromacs.org >>> http://lists.gromacs.org/mailman/listinfo/gmx-users >>> Please search the archive at >>> http://www.gromacs.org/Support/Mailing_Lists/Search before posting! >>> Please don't post (un)subscribe requests to the list. Use the www >>> interface or send it to gmx-users-requ...@gromacs.org. >>> Can't post? Read http://www.gromacs.org/Support/Mailing_Lists >>> >> >> >> >> -- >> Ahmet YILDIRIM >> > > > > -- > Ahmet YILDIRIM > > > > > -- > gmx-users mailing list gmx-users@gromacs.org > http://lists.gromacs.org/mailman/listinfo/gmx-users > Please search the archive at > http://www.gromacs.org/Support/Mailing_Lists/Search before posting! > Please don't post (un)subscribe requests to the list. Use the > www interface or send it to gmx-users-requ...@gromacs.org. > Can't post? Read http://www.gromacs.org/Support/Mailing_Lists > -- Ahmet YILDIRIM
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