Hi, On Nov 23, 2011, at 8:24 AM, Alex Jemulin wrote:
> Thanks for your reply > Could you tell me the name of the file to download and how to install it? Please follow the instructions at http://www.gromacs.org/Developer_Zone/Git/Basic_Git_Usage and http://www.gromacs.org/Developer_Zone/Git/Git_Tutorial. In short: git clone git://git.gromacs.org/gromacs.git git checkout --track -b release-4-5-patches origin/release-4-5-patches If you are using CMake, you can then just install this like the normal .tar.gz distributions from the gromacs home page. If you are using autotools, do a ./bootstrap before the configure step. Best, Carsten > > Bests > > Da: Carsten Kutzner <ckut...@gwdg.de> > A: Alex Jemulin <alexbioi...@yahoo.com>; Discussion list for GROMACS users > <gmx-users@gromacs.org> > Inviato: Martedì 22 Novembre 2011 13:25 > Oggetto: Re: [gmx-users] do_dssp segmentation fault > > Dear Alex, > > On Nov 22, 2011, at 9:28 AM, Alex Jemulin wrote: > > > Dear all > > I'm experiencing the following error in Gromacs 4.5 with do_dssp > > > > Here is the command > > do_dssp -f md.xtc -s md.tpr -o secondary-structure.xpm -sc > > secondary-structure.xvg -dt 10 > > > > give me the following error > > segmentation fault > > > > How can I fix it? > I removed a segmentation fault in do_dssp a couple of weeks ago but this is > post version 4.5.5. So you need to check out the current release-4-5-patches > from > the git server. I believe this will fix your problem. > > Carsten > > > > > Thank in ad > > -- > > gmx-users mailing list gmx-users@gromacs.org > > http://lists.gromacs.org/mailman/listinfo/gmx-users > > Please search the archive at > > http://www.gromacs.org/Support/Mailing_Lists/Search before posting! > > Please don't post (un)subscribe requests to the list. Use the > > www interface or send it to gmx-users-requ...@gromacs.org. > > Can't post? Read http://www.gromacs.org/Support/Mailing_Lists > > > -- gmx-users mailing list gmx-users@gromacs.org http://lists.gromacs.org/mailman/listinfo/gmx-users Please search the archive at http://www.gromacs.org/Support/Mailing_Lists/Search before posting! Please don't post (un)subscribe requests to the list. Use the www interface or send it to gmx-users-requ...@gromacs.org. Can't post? Read http://www.gromacs.org/Support/Mailing_Lists