mohammad agha wrote:
Dear Prof.

I have a system consists of 10 micelle after production simulation. How can I select a micelle with 92 monomer? I know that I should use from g_select, but I don't know which argument is proper for me. I also checked -select help in g_select program.
Please help me.


If you just need an index group with a single micelle, use make_ndx and choose the residue numbers that comprise the micelle. g_select can do the same, but this tool is better suited for more complex operations and creation of dynamic indices.

-Justin

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========================================

Justin A. Lemkul
Ph.D. Candidate
ICTAS Doctoral Scholar
MILES-IGERT Trainee
Department of Biochemistry
Virginia Tech
Blacksburg, VA
jalemkul[at]vt.edu | (540) 231-9080
http://www.bevanlab.biochem.vt.edu/Pages/Personal/justin

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