The Heme molecule is not available in the Martini web site. We have been working on a model but it won't be ready for release before some time.
You could try to make you own model. XAvier. On Jan 16, 2012, at 20:34, Dariush Mohammadyani <d.mohammady...@gmail.com> wrote: > Hi all, > Has anybody used Coarse grained model for Cytochrome C? I could create a > model using MARTINI forcefiels (using martinize.py script and 1HRC.pdb file), > but it does not have HEM and HOH groups. Can anybody help me? > > > Kind Regards, > Dariush Mohammadyani > Department of Structural Biology > University of Pittsburgh School of Medicine > Biomedical Science Tower 3 > 3501 Fifth Avenue > Pittsburgh, PA 15261 > USA > > -- > gmx-users mailing list gmx-users@gromacs.org > http://lists.gromacs.org/mailman/listinfo/gmx-users > Please search the archive at > http://www.gromacs.org/Support/Mailing_Lists/Search before posting! > Please don't post (un)subscribe requests to the list. Use the > www interface or send it to gmx-users-requ...@gromacs.org. > Can't post? Read http://www.gromacs.org/Support/Mailing_Lists -- gmx-users mailing list gmx-users@gromacs.org http://lists.gromacs.org/mailman/listinfo/gmx-users Please search the archive at http://www.gromacs.org/Support/Mailing_Lists/Search before posting! Please don't post (un)subscribe requests to the list. Use the www interface or send it to gmx-users-requ...@gromacs.org. Can't post? Read http://www.gromacs.org/Support/Mailing_Lists
